Module Ensembl::Core
In: lib/ensembl/core/activerecord.rb
lib/ensembl/core/project.rb
lib/ensembl/core/slice.rb
lib/ensembl/core/transcript.rb
lib/ensembl/core/transform.rb
lib/ensembl/db_connection.rb

DESCRIPTION

The Ensembl::Core module covers the core databases from ensembldb.ensembl.org and covers mainly sequences and their annotations. For a full description of the database (and therefore the classes that are available), see www.ensembl.org/info/software/core/schema/index.html and www.ensembl.org/info/software/core/schema/schema_description.html

Classes and Modules

Module Ensembl::Core::Sliceable
Class Ensembl::Core::Analysis
Class Ensembl::Core::AnalysisDescription
Class Ensembl::Core::AssemblyException
Class Ensembl::Core::AssemblyLink
Class Ensembl::Core::AttribType
Class Ensembl::Core::CoordSystem
Class Ensembl::Core::DBConnection
Class Ensembl::Core::DensityFeature
Class Ensembl::Core::DensityType
Class Ensembl::Core::Dna
Class Ensembl::Core::DnaAlignFeature
Class Ensembl::Core::Exon
Class Ensembl::Core::ExonStableId
Class Ensembl::Core::ExonSupportingFeature
Class Ensembl::Core::ExonTranscript
Class Ensembl::Core::ExternalDb
Class Ensembl::Core::ExternalSynonym
Class Ensembl::Core::Gap
Class Ensembl::Core::Gene
Class Ensembl::Core::GeneAttrib
Class Ensembl::Core::GeneStableId
Class Ensembl::Core::GoXref
Class Ensembl::Core::Karyotype
Class Ensembl::Core::Map
Class Ensembl::Core::Marker
Class Ensembl::Core::MarkerFeature
Class Ensembl::Core::MarkerMapLocation
Class Ensembl::Core::MarkerSynonym
Class Ensembl::Core::Meta
Class Ensembl::Core::MetaCoord
Class Ensembl::Core::MiscAttrib
Class Ensembl::Core::MiscFeature
Class Ensembl::Core::MiscFeatureMiscSet
Class Ensembl::Core::MiscSet
Class Ensembl::Core::ObjectXref
Class Ensembl::Core::OligoArray
Class Ensembl::Core::OligoFeature
Class Ensembl::Core::OligoProbe
Class Ensembl::Core::PredictionExon
Class Ensembl::Core::PredictionTranscript
Class Ensembl::Core::ProteinAlignFeature
Class Ensembl::Core::ProteinFeature
Class Ensembl::Core::RegulatoryFactor
Class Ensembl::Core::RegulatoryFeature
Class Ensembl::Core::RepeatConsensus
Class Ensembl::Core::RepeatFeature
Class Ensembl::Core::SeqRegion
Class Ensembl::Core::SeqRegionAttrib
Class Ensembl::Core::SimpleFeature
Class Ensembl::Core::Slice
Class Ensembl::Core::Transcript
Class Ensembl::Core::TranscriptAttrib
Class Ensembl::Core::TranscriptStableId
Class Ensembl::Core::TranscriptSupportingFeature
Class Ensembl::Core::Translation
Class Ensembl::Core::TranslationAttrib
Class Ensembl::Core::TranslationStableId
Class Ensembl::Core::Xref

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